ОПУБЛИКОВАННЫЕ

Todorov SD, Tagg J, Algburi A, Tiwari SK, Popov I, Weeks R, Mitrokhin OV, Kudryashov IA, Kraskevich DA, Chikindas ML. The Hygienic Significance of Microbiota and Probiotics for Human Wellbeing. Probiotics Antimicrob Proteins. 2024 Dec 17. doi: 10.1007/s12602-024-10419-9. Epub ahead of print. PMID: 39688648.

Popov, I.V., Popov, I.V., Chebotareva, I.P. et al. Differences in gut microbiota composition, diversity, and predicted functional activity between wild and captive zoo Carollia perspicillata in a One Health perspective. Braz J Microbiol (2025). https://doi.org/10.1007/s42770-025-01630-z.

Neurov, A.M.; Zaikina, A.A.; Prazdnova, E.V.; Anuj, R.; Rudoy, D.V. Modulation of Stress-Related Protein in the African Catfish (Clarias gariepinus) Using Bacillus-Based Non-Ribosomal Peptides. Microbiol. Res. 2024, 15, 2743-2763. https://doi.org/10.3390/microbiolres15040182.

В. А. Григорьев, М. П. Куликов, М. С. Мазанко [и др.] Влияние качества корма на скорость роста, биохимические показатели и микробиом кишечника стерляди Acipenser ruthenus// Наука Юга России. – 2024. – Т. 20, № 1. – С. 70-76. – DOI 10.7868/25000640240109. – EDN KBYJDG.

Е. Н. Пономарева, В. А. Григорьев, А. Ю. Гуляева [и др.] Влияние кормов с пробиотиками на рост, развитие и поведенческие реакции карпа Cyprinus carpio, стерляди Acipenser ruthenus и бестера Huso Huso х Acipenser ruthenus// Наука Юга России. – 2024. – Т. 20, № 2. – С. 83-90. – DOI 10.7868/S25000640240211. – EDN BCISEP.

E. Prazdnova, A. Bren, L. Golovko [et al.] Quorum sensing and its inhibition mechanisms// Bio web of conferences : XVII International Scientific and Practical Conference “State and Development Prospects of Agribusiness” (INTERAGROMASH 2024), Rostov-on-Don, 22–25 мая 2024 года. Vol. 113. – EDP Sciences: EDP Sciences, 2024. – P. 05025. – DOI 10.1051/bioconf/202411305025. – EDN ERQKUL.

Н. Г. Васильченко, К. В. Механцева, Ф. Д. Иванов [и др.] Биотехнологически перспективные свойства бактерий родов Bacillus и Paenibacillus, выделенных из ризосферы пшеницы озимой (Triticum aestivum L.). Часть 1// Известия высших учебных заведений. Северо-Кавказский регион. Серия: Естественные науки. – 2024. – № 4-1(224-1). – С. 77-89. – DOI 10.18522/1026-2237-2024-4-1-77-89. – EDN FIUPPK.

E. N. Ponomareva, M. N. Sorokina, V. A. Grigoriev [et al.] Probiotic Bacillus amyloliquefaciens B-1895 improved growth of juvenile trout// Food Science of Animal Resources. – 2024. – Vol. 44, No. 4. – P. 805-816. – DOI 10.5851/kosfa.2023.e75. – EDN WWTKVQ.

Ю. A. Иванов, A. Д. Лукьянов, Д. Ю. Донской, Д. В. Рудой Моделирование и идентификация элемента Пельтье TEC1-12706 для применения в малообъемных биореакторах искусственного ЖКТ рыб// Агроинженерия. – 2024. – Т. 26, № 3. – С. 58-65. – DOI 10.26897/2687-1149-2024-3-58-65. – EDN BZMDHL.

Kornienko, I. V., Aramova, O. Y., Tishchenko, A. A., Rudoy, D. V., & Chikindas, M. L. 2024. RNA Stability: A Review of the Role of Structural Features and Environmental Conditions. Molecules (Basel, Switzerland), 29(24), 5978. https://doi.org/10.3390/molecules29245978.

R.V. Skripnichenko, D.S. Chelombitskaya, E.V. Prazdnova, M.P. Kulikov, A.M. Neurov, A.A. Zaikina, V.A. Grigoryev, M.N. Sorokina, V.A. Chistyakov, M.L. Chikindas, D.V. Rudoy. 2024. Potential probiotic Bacillus strains with antioxidant and antimutagenic activity increased weight gain and altered hsp70, cxc, tnfα, il1β, and lysC gene expression in Clarias gariepinus. Fishes 9:476. https://doi.org/10.3390/fishes9120476.

Todorov, S. D., Tagg, J., Algburi, A., Tiwari, S. K., Popov, I., Weeks, R., Mitrokhin, O. V., Kudryashov, I. A., Kraskevich, D. A., & Chikindas, M. L. 2024. The Hygienic Significance of Microbiota and Probiotics for Human Wellbeing. Probiotics and antimicrobial proteins, 10.1007/s12602-024-10419-9. Advance online publication. https://doi.org/10.1007/s12602-024-10419-9.

Ohlopkova, O. V., Stolbunova, K. A., Popov, I. V., Popov, I. V., Kabwe, E., Davidyuk, Y. N., Stepanyuk, M. A., Moshkin, A. D., Kononova, Y. V., Lukbanova, E. A., Ermakov, A. M., Chikindas, M. L., Sobolev, I. A., Khaiboullina, S. F., & Shestopalov, A. M. 2024. Detection of Brno loanvirus (Loanvirus brunaense) in common noctule bats (Nyctalus noctula) in Southern Russia. Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology], 10.1007/s42770-024-01587-5. Advance online publication. https://doi.org/10.1007/s42770-024-01587-5.

S.D. Todorov, K.O. Carneiro, T.A. Lipilkina, H.K. Do, Ma. Miotto, J. De Dea Lindner, M.L. Chikindas. 2024. Beneficial microorganisms for the health‑promoting in oyster aquaculture: realistic alternatives. Aquaculture International. https://doi.org/10.1007/s10499-024-01651-9.

I.V. Popov, N. Belkassem, R. Schrijver, I.P. Chebotareva, M.L. Chikindas, A.M. Ermakov, K. Venema. 2024. Modulation of poultry cecal microbiota by a phytogenic blend and high concentrations of casein in a validated in vitro cecal chicken alimentary tract model. Veterinary Sciences 11(8):377. https://doi.org/10.3390/vetsci11080377.

S.D. Todorov, J.M.S. Lima, J.E.V. Bucheli, I.V. Popov, S.K. Tiwari, M.L. Chikindas. 2024. Probiotics for aquaculture: Hope, truth, and reality. Probiotics and Antimicrobial Proteins. 2024 May 27. https://doi.org/10.1007/s12602-024-10290-8.

A.R. Algburi, S.M. Jassim, I.V. Popov, R. Weeks, M.L. Chikindas. 2024. Lactobacillus acidophilus VB1 co-aggregates and inhibits biofilm formation of chronic otitis media-associated pathogens. Brazilian Journal of Microbiology. 024 May 24. https://doi.org/10.1007/s42770-024-01363-5.

S.D. Todorov, R. Weeks, K. Khosravi-Darani, M.L. Chikindas. 2024. Exploration and understanding of beneficial properties of lactic acid bacteria: 10 years of experience in Applied Food Biotechnology Applied Food Biotechnology, Vol. 11 No. 1 https://doi.org/10.22037/afb.v11i1.43665.

S.D. Todorov, A.L. Baretto Penna, K. Venema, W.H. Holzapfel, M.L. Chikindas. 2024. Recommendations for the use of standardised abbreviations for the former Lactobacillus genera, reclassified in the year 2020. Beneficial Microbes 15:1-4. https://doi.org/10.1163/18762891-20230114.

S.D. Todorov, V. Farias Alves, I. Popov, R. Weeks, U. Manoel Pinto, N. Petrov. I.V. Ivanova, M.L. Chikindas. 2024. Antimicrobial compounds in wine. Probiotics and Antimicrobial Proteins 16:763-783. https://doi.org/10.1007/s12602-023-10177-0.

I.V.Popov, S. Skripkin,  M.S. Mazanko, E.E. Epimakhova, E.V. Prazdnova, O.V. Dilekova, S.P. Dannikov, I.V. Popov, V.I. Trukhachev, E.I. Rastovarov, T.N.Derezina, N.A.Kochetkova, R.M.Weeks, A.M.Ermakov, M.L. Chikindas. 2024. Effects of spore-forming Bacillus probiotics on growth performance, intestinal morphology, and immune system of broilers housed on deep litter. The Journal of Applied Poultry Research 33:100396. doi: 10.1016/j.japr.2023.100396.

I.V. Popov, O.V. Ohlopkova, I.M. Donnik, P.V. Zolotukhin, A. Umanets, S.N. Golovin, A.V. Malinovkin, A.A. Belanova, P.V. Lipilkin, T.A. Lipilkina, I.V. Popov, A.K. Logvinov, N.A. Dubovitsky, K.A. Stolbunova, I.A. Sobolev, A.Yu. Alekseev, A.M. Shestopalov, V.N. Burkova, M.L. Chikindas, K. Venema, A.M. Ermakov. 2023. Detection of coronaviruses in insectivorous bats of Fore-Caucasus, 2021. Scientific Reports 13:236. doi:10.1038/s41598-023-29099-6.

S.D. Todorov, I. Popov, R. Weeks, and M.L. Chikindas. 2022. Use of bacteriocins and bacteriocinogenic beneficial organisms in food products: Benefits, challenges, concerns. Foods 11:3145. doi: 10.3390/foods11193145.

M.S. Mazanko, I.V. Popov, E.V. Prazdnova, A.G. Refeld, A.B. Bren, G.А. Zelenkova, V.A. Chistyakov, A. Algburi, R.W. Weeks, A.M. Ermakov, and M.L. Chikindas. 2022. Beneficial effects of spore-forming Bacillus probiotic bacteria isolated from poultry microbiota on broilers’ health, growth performance, and immune system. Frontiers in Veterinary Science. 9:877360. doi: 10.3389/fvets.2022.877360.

M. Falduto, F. Smedile, M. Zhang, T. Zheng, J. Zhu, Q. Huang, R. Weeks, A.M. Ermakov, and M.L. Chikindas. 2022. Anti-obesity effects of chenpi: an artificial gastrointestinal system study. Microbial Biotechnology 15:874-885. doi: 10.1111/1751-7915.14005.

E.V. Prazdnova, A.V. Gorovtsov, N.G. Vasilchenko, M.P. Kulikov, V.N. Statsenko, A.A. Bogdanova, A.G. Refeld, Ya.A. Brislavskiy, V. Chistyakov, and M.L. Chikindas. 2022. Quorum-sensing inhibition by Gram-positive bacteria. Microorganisms 10:350. 350. doi: 10.3390/microorganisms10020350

M.S. Mazanko, E.V. Prazdnova, M.P. Kulikov, T.A. Maltseva, D.V. Rudoy, and M.L. Chikindas. 2022. Antioxidant and antimutagenic properties of probiotic Lactobacilli determined using LUX-biosensors. Enzyme and Microbial Technology 155:109980. doi: 10.1016/j.enzmictec.2021.109980.

I.V. Popov, M.S. Mazanko, E.D. Kulaeva, S.N. Golovin, A.V. Malinovkin, I.S. Aleshukina, A.V. Aleshukina, E.V. Prazdnova, T.I. Tverdokhlebova, M.L. Chikindas, and A.M. Ermakov. 2021. Gut microbiota of bats: pro‑mutagenic properties and possible frontiers in preventing emerging disease. Scientific Reports 11:21075. doi: 10.1038/s41598-021-00604-z.

S. Sushkova, T. Minkina, V. Chaplygin, D. Nevidomskaya, V. Rajput, T. Bauer, M. Mazarji, A.B. Bren, I. Popov, and M. Mazanko. 2021. Subcritical water extraction of organic acids from chicken manure. Journal of the Science of Food and Agriculture 101(4):1523-1529. doi: 10.1002/jsfa.10768.
https://onlinelibrary.wiley.com/doi/10.1002/jsfa.10768

M. AL-Dulaimi, A. Algburi, A. Abdelhameed, M.S. Mazanko, D.V. Rudoy, A.M. Ermakov, and M.L. Chikindas. 2021. Antimicrobial and anti-biofilm activity of polymyxin E alone and in combination with probiotic strains of Bacillus subtilis KATMIRA1933 and Bacillus amyloliquefaciens B-1895 against clinical isolates of selected Acinetobacter spp.: A preliminary study. Pathogens 10:1574. doi: 10.3390/pathogens10121574.

N.A. Ushakova, V.G. Pravdin, L.Z. Kravtsova, S.V. Ponomarev, T.S Gridina, E.N. Ponomareva, D.V. Rudoy, and M.L. Chikindas. 2021. Complex bioactive supplements for aquaculture – Evolutionary development of probiotic concept. Probiotics and Antimicrobial Proteins 13:1696-1708. doi: 10.1007/s12602-021-09835-y.

R. Mahoney, R. Weeks, V. Chistyakov, A. Ermakov, I. Popov, D. Rudoy, A. Bren, and M.L. Chikindas. 2021. Fermented duckweed as a potential feed additive with poultry beneficial bacilli probiotics. Probiotics and Antimicrobial Proteins 13:1425-1432. doi: 10.1007/s12602-021-09794-4.

A.Z. Pepoyan, E.S. Pepoyan, L. Galstyan, N.A. Harutyunyan, V.V. Tsaturyan, T. Torok, A.M. Ermakov, I.V. Popov, R. Weeks, and Michael L. Chikindas. 2021. The effect of immunobiotic/psychobiotic Lactobacillus acidophilus strain INMIA 9602 Er 317/402 Narine on gut Prevotella in Familial Mediterranean Fever: Gender-associated effects. Probiotics and Antimicrobial Proteins 13:1306-1315. doi: 10.1007/s12602-021-09779-3.

V. Kumar, B. Singh, M. van Belkum, D.B. Diep, M.L. Chikindas, A.M. Ermakov, and S.K. Tiwari. 2021. Halocins, natural antimicrobials of Archaea: Exotic or special, or both? Biotechnology Advances 53:107834. doi: 10.1016/j.biotechadv.2021.107834.

V. Trukhachev, V.K. Chmykhalo, A.A. Belanova, D.K. Beseda, M.L. Chikindas, A.B. Bren, A.M. Ermakov, I.M. Donnik, M.M. Belousova, and P.V. Zolotukhin. 2021. Probiotic biomarkers and models upside down: from humans to animals. Veterinary Microbiology 261:109156. doi: 10.1016/j.vetmic.2021.109156.

A. Zoghi, R. Massoud, S.D. Todorov, M.L. Chikindas, I. Popov, S. Smith, and K. Khosravi-Darani. 2021. Role of the lactobacilli in food bio-decontamination: friends with benefits. Enzyme and Microbial Technology 150:109861. doi: 10.1016/j.enzmictec.2021.109861.

K.A. Demin, A.G. Refeld, A.A. Bogdanova, E.V. Prazdnova, I.V. Popov, O. Ju. Kutsevalova, A.M. Ermakov, A.B. Bren, D.V. Rudoy, V.A. Chistyakov, W. Weeks, and M.L. Chikindas. 2021. Mechanisms of Candida spp. resistance to antimycotics and promising ways to overcome it: The role of probiotics. Probiotics and Antimicrobial Proteins 13(4):926-948. doi: 10.1007/s12602-021-09776-6.

A. Algburi, H.M. Al-Hasani, T.K. Ismael, A. Abdelhameed, R. Weeks, A.M. Ermakov, M.L. Chikindas. 2021. Antimicrobial activity of Bacillus subtilis KATMIRA1933 and Bacillus amyloliquefaciens B-1895 against Staphylococcus aureus biofilms isolated from wound infection. Probiotics and Antimicrobial Proteins 13:125-134. doi: 10.1007/s12602-020-09673-4.

G. Kumar, S. Tewari, J. Tagg, M.L. Chikindas, I. Popov, and S.K. Tiwari. 2021. Can probiotics emerge as effective therapeutic agents in apical periodontitis? A Review. Probiotics and Antimicrobial Proteins 13:299-314. doi: 10.1007/s12602-021-09750-2.

I.V. Popov, A. Algburi, E.V. Prazdnova, M.S. Mazanko, V. Elisashvili, A.B. Bren, V.A. Chistyakov, E.V. Tkacheva, V.I. Trukhachev, I.M. Donnik, Y.A. Ivanov, D. Rudoy, A.M. Ermakov, R.M. Weeks, and M.L. Chikindas. 2021. A Review of the effects and production of spore-forming probiotics for poultry. Animals 11(7):1941. doi: 10.3390/ani11071941.

Donnik, I.M., Popov, Ig.V., Sereda, S.V., Popov, Il.V., Chikindas,M.L., and A. M. Ermakov. 2021. Coronavirus infections of animals: Future risks to humans. Biological Bulletin of the Russian Academy of Sciences 48(1):26–37. 10.1134/S1062359021010052

Abdullah, A. Asghar, A. Algburi, Q. Huang, T. Ahmad, H. Zhong, H.U. Javed, A.M. Ermakov, and M.L. Chikindas. 2021. Anti-biofilm potential of Elletaria cardamomum (green cardamon) essential oil against Escherichia coli O157:H7 and Salmonella Typhimurium JSG 1748. Frontiers in Microbiology 12:620227. doi: 10.3389/fmicb.2021.620227.

M. Hassanpour Tazehabadi, A. Algburi, I.V. Popov, A.M. Ermakov, V.A. Chistyakov, E. Prazdnova, R. Week, and M.L. Chikindas. 2021. Probiotic bacilli inhibit Salmonella biofilm formation without killing planktonic cells. Frontiers in Microbiology 12:615328. doi: 10.3389/fmicb.2021.615328.

R. Weeks, A. Algburi, and M.L. Chikindas. 2021. Antimicrobial peptides and peptidomimetics for the control of antimicrobial resistance. Chapter 7 in: Sustainable Agriculture Reviews 49. Mitigation of Antimicrobial Resistance. Vol. 2. Natural and Synthetic Approaches. Harsh­ Panwar, Chetan ­Sharma, Eric ­Lichtfouse,­ Editors. Springer Nature Switzerland AG. Pages 205-249. doi: 10.1007/978-3-030-58259-3_7.

A. Abdullah, A. Algburi, A. Asghar, Q. Huang, W. Mustfa, H.U. Javed, S. Zehm, and M.L. Chikindas. 2021. Black cardamom essential oil prevents Escherichia coli O157:H7 and Salmonella Typhimurium JSG 1748 biofilm formation through inhibition of quorum sensing. Journal of Food Science and Technology 58:3183-3191. doi: 10.1007/s13197-020-04821-8.

S.K. Tiwari, L.M.T. Dicks, I.V. Popov, A. Karaseva, A.M. Ermakov, A. Suvorov, J.R. Tagg, R. Weeks and M.L. Chikindas. 2020. Probiotics at war against viruses: What is missing from the picture? Frontiers in Microbiology 11:1877. doi: 10.3389/fmicb.2020.01877.

A. Algburi, S.A. Alazzawi, A.I. Ali Al-Ezzy, R. Weeks, V. Chistyakov, and M.L. Chikindas. 2020. Potential probiotics Bacillus subtilis KATMIRA1933 and Bacillus amyloliquefaciens B-1895 co-aggregate with clinical isolates of Proteus mirabilis and prevent biofilm formation. Probiotics and Antimicrobial Proteins 12:1471-1483. doi: 10.1007/s12602-020-09631-0.

A.Z. Pepoyan, A.M. Manvelyan, M.H. Balayan, G. McCabe, V.V. Tsaturyan, A. Abrahamyan, V.G. Melnikov, M.L. Chikindas, and A.V. Karlyshev. 2020. The effectiveness of potential probiotics Lactobacillus rhamnosus Vahe and Lactobacillus delbrueckii IAHAHI in irradiated rats depends on the nutritional stage of the host. Probiotics and Antimicrobial Proteins.12:1439-1450. doi: 10.1007/s12602-020-09662-7.

H. Yeh, S.A. Skubel, H. Patel, D. Cai Shi, D. Bushek, and M.L. Chikindas. 2020. From farm to fingers: An exploration of probiotics for oysters, from production to human consumption. Probiotics and Antimicrobial Proteins 12:351-364. doi: 10.1007/s12602-019-09629-3.

РУКОПИСИ ПРИНЯТЫ К ПУБЛИКАЦИИ И ГОТОВЯТСЯ К ПЕЧАТИ

E.V. Prazdnova, M.S. Mazanko, V.A. Chistyakov, A.A. Bogdanova, A.G. Refeld, E.Y. Kharchenko, and M.L. Chikindas. 2022. Antimutagenic activity as a criterion of potential probiotic properties. Accepted for publication in: Probiotics and Antimicrobial Proteins. doi:10.1007/s12602-021-09870-9. [Epub ahead of print].

S.D. Todorov, I.V. Ivanova, I. Popov, R. Weeks, and M.L. Chikindas. 2021. Bacillus spore-forming probiotics: benefits with concerns? Critical Reviews in Microbiology. doi:10.1080/1040841X.2021.1983517. [Epub ahead of print].

КНИГИ

A. Bogdanova, A. Refeld, E. Prazdnova, M. Chikindas, A. Olshevskaya, T. Maltseva, and V. Chegge. 2022. Polyketides are agents for probiotics antagonizing pathogenic microbiota. In: Beskopylny A., Shamtsyan M. (eds) XIV International Scientific Conference “INTERAGROMASH 2021″. Lecture Notes in Networks and Systems, vol 246, pp. 60-68. Springer, Cham. doi: 10.1007/978-3-030-81619-3_7.
https://link.springer.com/chapter/10.1007/978-3-030-81619-3_7